Protein ZmYAB5
ZmYAB5 is a protein in the C2C2-YABBY family.
Information
TF Name: ZmYAB5
Species: Maize
TF Family: C2C2-YABBY
Gene Name(Synonym): YAB5
Uniprot ID: B4FFC4
Subgenome: 2

Protein ZmYAB5

ZmYAB5 is a protein in the C2C2-YABBY family.

Overview of domains present in v5 transcripts
PF04690PF09011
Zm00001eb134520_T002
Zm00001eb134520_T001
Zm00001eb134520_T003
Zm00001eb134520_T004
Zm00001eb134520_T005
Zm00001eb134520_T006

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d041277DAPseq no logo sequence fimo position
Zm00001d041277DAPseq no logo sequence fimo position
Zm00001d041277ChIPseq no logo sequence fimo position
Zm00001d041277PChIPseq no logo sequence fimo position

Interactions where ZmYAB5 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmYAB5 is the target  
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There are 55 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb134520_T002 from maize genome v5

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTL
HDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHR
EAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTL
HDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHR
EAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTL
HDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHR
EAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTL
HDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHR
EAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTL
HDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHR
EAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTL
HDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHR
EAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04690
PF09011
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Nucleotide Sequence
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TATCTTCCACCCACTCATTGTAGCA...

GRMZM2G116646_T01 from maize genome v3

Amino Acid Sequence
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MLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTLHDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQN
EQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHREAFSTAAKNWAHYPNIHFGLDDSGREGKKKLV
DHEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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CAATCATGGCATTTCCCCTCTCTCT...

GRMZM2G116646_T02 from maize genome v3

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLH
DDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHRE
AFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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CAATCATGGCATTTCCCCTCTCTCT...

GRMZM2G116646_T03 from maize genome v3


Related TFome: pUT3389

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLH
DDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARRKAPFHVHADDHAYACLNLHNLLFLA

Nucleotide Sequence
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AAAGCACTGCTGCTTGCCAGTATTG...

GRMZM2G116646_T04 from maize genome v3

Amino Acid Sequence
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MLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTLHDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQN
EQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHREAFSTAAKNWAHYPNIHFGLDDSGREGKKKLV
DHEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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TAGTGACAAACTGACAACAACAAAA...

GRMZM2G116646_T05 from maize genome v3

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLH
DDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARRKAPFHVHADDHAYACLNLHNLLFLA

Nucleotide Sequence
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GCTTTGCCTTGCTTGCCCCCACACG...

Zm00001d041277_T001 from maize genome v4

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLH
DDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHRE
AFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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AAAGCACTGCTGCTTGCCAGTATTG...

Zm00001d041277_T002 from maize genome v4

Amino Acid Sequence
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MLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLHDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNE
QHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHREAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVD
HEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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ACAACAAATAAAAGCACTGCTGCTT...

Zm00001d041277_T003 from maize genome v4

Amino Acid Sequence
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MRRAQLQRRGSGFRRRITDSSRKRYAGSKRTTPTLTTGKPSARQPRIGHIIQTSISV

Nucleotide Sequence
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CAGGAGAACATCAAGGTCCATGGCA...

Zm00001d041277_T005 from maize genome v4

Amino Acid Sequence
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MLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLHDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNE
QHLLQEQTLNNNARRKAPFHVHADDHAYACLNLHNLLFLA

Nucleotide Sequence
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ACAACAAATAAAAGCACTGCTGCTT...

Zm00001d041277_T006 from maize genome v4

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLH
DDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARRKAPFHVHADDHAYACLNLHNLLFLA

Nucleotide Sequence
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GCTTTGCCTTGCTTGCCCCCACACG...

Zm00001eb134520_T001 from maize genome v5

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTL
HDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARQKRQRVPSAYNRFIKEEIRRIKANNPDINHREA
FSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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TATCTTCCACCCACTCATTGTAGCA...

Zm00001eb134520_T003 from maize genome v5

Amino Acid Sequence
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MLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLHDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNE
QHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHREAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVD
HEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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GTAGCAATCATGGCATTTCCCCTCT...

Zm00001eb134520_T004 from maize genome v5

Amino Acid Sequence
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MSSAQIAPADHVCYVHCSFCNTVLAVSVPGNSMLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLH
DDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNEQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHRE
AFSTAAKNWAHYPNIHFGLDDSGREGKKKLVDHEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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GTAGCAATCATGGCATTTCCCCTCT...

Zm00001eb134520_T005 from maize genome v5

Amino Acid Sequence
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MLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQENIKVHGINGTLHDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQNE
QHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHREAFSTAAKNWAHYPNIHFGLDDSGREGKKKLVD
HEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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AAAGCTACTACCTGGTGAGTGTCCC...

Zm00001eb134520_T006 from maize genome v5

Amino Acid Sequence
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MLNIVTVRCGHCANLLSVNLRALMHSLPEQDHQLQQENIKVHGINGTLHDDHQYCGHLDQLGSSSSSRFRRLPVMCSPQN
EQHLLQEQTLNNNARPPEKRQRVPSAYNRFIKEEIRRIKANNPDINHREAFSTAAKNWAHYPNIHFGLDDSGREGKKKLV
DHEAAASVVAVAAAPTAAKKIQGFY

Nucleotide Sequence
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AAAGCTACTACCTGGTGAGTGTCCC...


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